Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | BK659_19730 | Not Available | Positive | 4436463 - 4437152 | 24854.1 |
| amino acid abc transporter permease | BK659_19735 | Not Available | Positive | 4437149 - 4437847 | 26144.7 |
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein | BK659_19740 | Not Available | Positive | 4437884 - 4438648 | 28069.2 |
| arac family transcriptional regulator | BK659_19745 | Not Available | Positive | 4438761 - 4439741 | 36360.6 |
| hypothetical protein | BK659_19750 | Not Available | Negative | 4439788 - 4444806 | 187028.0 |
| bifunctional succinylornithine transaminase/acetylornithine transaminase | BK659_19755 | Not Available | Positive | 4445137 - 4446357 | 43405.1 |
| arginine/ornithine succinyltransferase subunit alpha | BK659_19760 | Not Available | Positive | 4446573 - 4447592 | 36976.8 |
| arginine n-succinyltransferase | BK659_19765 | Not Available | Positive | 4447675 - 4448700 | 37395.7 |
| succinylglutamate-semialdehyde dehydrogenase | BK659_19770 | Not Available | Positive | 4448700 - 4450166 | 51220.9 |
| n-succinylarginine dihydrolase | BK659_19775 | Not Available | Positive | 4450309 - 4451655 | 48962.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
