Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | BK659_19530 | Not Available | Positive | 4397705 - 4398202 | 18206.0 |
| pyridoxamine 5'-phosphate oxidase | BK659_19535 | Not Available | Negative | 4398409 - 4399014 | 22357.9 |
| gnat family n-acetyltransferase | BK659_19540 | Not Available | Negative | 4399048 - 4399533 | 17815.3 |
| dehydrogenase | BK659_19545 | Not Available | Positive | 4399802 - 4400146 | 12263.5 |
| polyketide cyclase | BK659_19550 | Not Available | Positive | 4400172 - 4400663 | 18329.7 |
| rna polymerase subunit sigma-24 | BK659_19555 | Not Available | Positive | 4400663 - 4401898 | 46042.4 |
| lysr family transcriptional regulator | BK659_19560 | Not Available | Negative | 4402168 - 4403022 | 31255.5 |
| hypothetical protein | BK659_19565 | Not Available | Positive | 4403112 - 4403549 | 16416.8 |
| short-chain dehydrogenase | BK659_19570 | Not Available | Negative | 4403664 - 4404422 | 26510.8 |
| lysr family transcriptional regulator | BK659_19575 | Not Available | Positive | 4404544 - 4405440 | 33350.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
