Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma | BK659_19475 | Not Available | Positive | 4384943 - 4385488 | 20572.6 |
| abc transporter substrate-binding protein | BK659_19480 | Not Available | Positive | 4385485 - 4386498 | 37117.3 |
| pili assembly chaperone | BK659_19490 | Not Available | Positive | 4387902 - 4389221 | 48421.1 |
| siderophore synthetase | BK659_19495 | Not Available | Negative | 4389301 - 4391211 | 72918.0 |
| laci family transcriptional regulator | BK659_19500 | Not Available | Negative | 4391394 - 4392425 | 37439.2 |
| gluconokinase | BK659_19505 | Not Available | Positive | 4392641 - 4393174 | 19034.8 |
| permease dsdx | BK659_19510 | Not Available | Positive | 4393260 - 4394612 | 47452.3 |
| alanine transaminase | BK659_19515 | Not Available | Negative | 4394712 - 4395932 | 45148.5 |
| lysine transporter lyse | BK659_19520 | Not Available | Positive | 4396162 - 4396824 | 23078.6 |
| arac family transcriptional regulator | BK659_19525 | Not Available | Positive | 4396891 - 4397379 | 18205.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
