Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maleylacetoacetate isomerase | BK659_19375 | Not Available | Positive | 4366178 - 4366816 | 23687.5 |
| transcriptional regulator hexr | BK659_19380 | Not Available | Negative | 4366946 - 4367815 | 31523.0 |
| glucose-6-phosphate dehydrogenase | BK659_19385 | Not Available | Positive | 4368013 - 4369482 | 55191.1 |
| 6-phosphogluconolactonase | BK659_19390 | Not Available | Positive | 4369469 - 4370182 | 25298.5 |
| keto-deoxy-phosphogluconate aldolase | BK659_19395 | Not Available | Positive | 4370200 - 4370865 | 23238.5 |
| intradiol ring-cleavage dioxygenase | BK659_19400 | Not Available | Positive | 4371228 - 4371953 | 26754.5 |
| class v aminotransferase | BK659_19405 | Not Available | Negative | 4371991 - 4373172 | 44213.1 |
| hypothetical protein | BK659_19410 | Not Available | Negative | 4373194 - 4373430 | 8887.9 |
| aldehyde dehydrogenase | BK659_19415 | Not Available | Positive | 4373633 - 4374100 | 17173.3 |
| 3-hydroxybutyryl-coa dehydratase | BK659_19420 | Not Available | Negative | 4374175 - 4374645 | 17059.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
