Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | BK659_19275 | Not Available | Positive | 4342338 - 4343630 | 45624.4 |
| sugar abc transporter permease | BK659_19280 | Not Available | Positive | 4343786 - 4344694 | 33805.2 |
| sugar abc transporter permease | BK659_19285 | Not Available | Positive | 4344687 - 4345532 | 30643.2 |
| sugar abc transporter atp-binding protein | BK659_19290 | Not Available | Positive | 4345536 - 4346696 | 42116.3 |
| porin | BK659_19295 | Not Available | Positive | 4346889 - 4348235 | 49596.6 |
| d-hexose-6-phosphate mutarotase | BK659_19300 | Not Available | Positive | 4348354 - 4349208 | 32349.2 |
| helix-turn-helix-type transcriptional regulator | BK659_19305 | Not Available | Positive | 4349394 - 4350353 | 35469.4 |
| hypothetical protein | BK659_19310 | Not Available | Negative | 4350357 - 4350962 | 23370.8 |
| flavodoxin | BK659_19315 | Not Available | Positive | 4351287 - 4351742 | 16120.2 |
| class ii aldolase | BK659_19320 | Not Available | Positive | 4351934 - 4352716 | 28065.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
