Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fis family transcriptional regulator | BK659_19175 | Not Available | Negative | 4317654 - 4319162 | 54753.2 |
| duf5064 domain-containing protein | BK659_19180 | Not Available | Negative | 4319365 - 4319724 | 13641.0 |
| carbamate kinase | BK659_19185 | Not Available | Negative | 4319784 - 4320713 | 32879.8 |
| ornithine carbamoyltransferase | BK659_19190 | Not Available | Negative | 4320870 - 4321880 | 37862.4 |
| arginine deiminase | BK659_19195 | Not Available | Negative | 4321951 - 4323207 | 46390.6 |
| arginine-ornithine antiporter | BK659_19200 | Not Available | Negative | 4323254 - 4324681 | 51084.0 |
| 3-methyladenine dna glycosylase 2 | BK659_19205 | Not Available | Positive | 4325141 - 4326004 | 30760.2 |
| acyl-coa transferase | BK659_19210 | Not Available | Negative | 4326566 - 4327915 | 48281.4 |
| hypothetical protein | BK659_19215 | Not Available | Negative | 4328097 - 4328492 | 14233.9 |
| biliverdin-producing heme oxygenase | BK659_19220 | Not Available | Negative | 4328653 - 4329255 | 21543.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
