Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-cyano-7-deazaguanine synthase quec | BK659_19125 | Not Available | Positive | 4307795 - 4308487 | 24548.1 |
| Trna-lys | Not Available | Not Available | Positive | 4308551 - 4308626 | Not Available |
| quinolinate synthase | BK659_19135 | Not Available | Positive | 4308890 - 4309948 | 38289.3 |
| hypothetical protein | BK659_19140 | Not Available | Negative | 4310036 - 4310524 | 18249.7 |
| cold-shock protein | BK659_19145 | Not Available | Negative | 4310622 - 4310834 | 7708.07 |
| glycine cleavage system protein t | BK659_19150 | Not Available | Negative | 4311235 - 4312359 | 40303.9 |
| l-serine ammonia-lyase | BK659_19155 | Not Available | Negative | 4312401 - 4313777 | 48868.1 |
| glycine dehydrogenase (aminomethyl-transferring) | BK659_19160 | Not Available | Negative | 4313979 - 4316828 | 102467.0 |
| glycine cleavage system protein h | BK659_19165 | Not Available | Negative | 4316838 - 4317221 | 13794.0 |
| hypothetical protein | BK659_19170 | Not Available | Positive | 4317251 - 4317445 | 7154.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
