Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | BK659_19020 | Not Available | Negative | 4288707 - 4290599 | 70225.2 |
| porin | BK659_19030 | Not Available | Negative | 4291198 - 4292541 | 48293.9 |
| hit family protein | BK659_19035 | Not Available | Positive | 4293468 - 4293893 | 16246.3 |
| hypothetical protein | BK659_19040 | Not Available | Positive | 4293897 - 4294103 | 7981.46 |
| cold-shock protein | BK659_19045 | Not Available | Negative | 4294191 - 4294793 | 21874.0 |
| aryl-sulfate sulfotransferase | BK659_19050 | Not Available | Positive | 4295472 - 4295807 | 12321.1 |
| fmdb family transcriptional regulator | BK659_19055 | Not Available | Positive | 4295987 - 4296208 | 7902.5 |
| aspartate--trna ligase | BK659_19060 | Not Available | Positive | 4296292 - 4298067 | 66267.6 |
| hypothetical protein | BK659_19065 | Not Available | Positive | 4298197 - 4298943 | 26585.2 |
| crossover junction endodeoxyribonuclease ruvc | BK659_19070 | Not Available | Positive | 4299134 - 4299658 | 18438.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
