Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinohemoprotein amine dehydrogenase maturation protein | BK659_18970 | Not Available | Negative | 4275137 - 4276567 | 53224.2 |
| quinohemoprotein amine dehydrogenase subunit alpha | BK659_18975 | Not Available | Negative | 4276661 - 4278241 | 57098.7 |
| haloacid dehalogenase | BK659_18980 | Not Available | Positive | 4278556 - 4279218 | 24252.2 |
| aldehyde dehydrogenase | BK659_18985 | Not Available | Positive | 4279374 - 4280864 | 53081.2 |
| fad-dependent oxidoreductase | BK659_18990 | Not Available | Negative | 4280988 - 4282283 | 47292.4 |
| peptidase s8 and s53 subtilisin kexin sedolisin | BK659_18995 | Not Available | Negative | 4282280 - 4282957 | 24284.7 |
| abc transporter atp-binding protein | BK659_19000 | Not Available | Negative | 4282947 - 4284665 | 63009.6 |
| sigma-54-dependent fis family transcriptional regulator | BK659_19005 | Not Available | Negative | 4284665 - 4286569 | 69242.5 |
| class ii aldolase | BK659_19010 | Not Available | Negative | 4286809 - 4287564 | 27941.5 |
| lysr family transcriptional regulator | BK659_19015 | Not Available | Positive | 4287739 - 4288695 | 36081.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
