Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| geranyl transferase | BK659_18870 | Not Available | Positive | 4254524 - 4255447 | 32961.7 |
| 1-deoxy-d-xylulose-5-phosphate synthase | BK659_18875 | Not Available | Positive | 4255490 - 4257415 | 68767.8 |
| methyltransferase type 12 | BK659_18880 | Not Available | Positive | 4257441 - 4258400 | 36540.5 |
| hypothetical protein | BK659_18885 | Not Available | Positive | 4258432 - 4259511 | 40895.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | BK659_18890 | Not Available | Positive | 4259566 - 4260495 | 33271.8 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | BK659_18895 | Not Available | Positive | 4260521 - 4261801 | 45412.8 |
| glucoamylase | BK659_18900 | Not Available | Positive | 4261966 - 4263792 | 69191.1 |
| hypothetical protein | BK659_18905 | Not Available | Negative | 4264071 - 4264442 | 13477.9 |
| hypothetical protein | BK659_18910 | Not Available | Positive | 4265074 - 4265463 | 14757.8 |
| nad-dependent dna ligase | BK659_18915 | Not Available | Positive | 4265475 - 4266107 | 23078.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
