Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shlb family hemolysin secretion/activation protein | BK659_18770 | Not Available | Negative | 4229252 - 4230979 | 63405.9 |
| hemolysin d | BK659_18775 | Not Available | Positive | 4231279 - 4232406 | 39712.2 |
| emrb/qaca family drug resistance transporter | BK659_18780 | Not Available | Positive | 4232403 - 4233995 | 57322.7 |
| hypothetical protein | BK659_18785 | Not Available | Negative | 4234071 - 4234505 | 15499.2 |
| alkylhydroperoxidase | BK659_18790 | Not Available | Negative | 4234834 - 4235274 | 16268.5 |
| hypothetical protein | BK659_18795 | Not Available | Positive | 4235960 - 4236340 | 13681.2 |
| mechanosensitive ion channel protein mscs | BK659_18800 | Not Available | Negative | 4236626 - 4238062 | 52233.0 |
| hydrolase | BK659_18805 | Not Available | Negative | 4238306 - 4238932 | 23001.5 |
| hydrolase | BK659_18810 | Not Available | Negative | 4238990 - 4239673 | 24387.3 |
| quercetin 2,3-dioxygenase | BK659_18815 | Not Available | Negative | 4239768 - 4240634 | 31369.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
