Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | BK659_18660 | Not Available | Negative | 4195529 - 4196197 | 25012.1 |
| peptidase | BK659_18665 | Not Available | Negative | 4196197 - 4196511 | 11710.2 |
| hypothetical protein | BK659_18670 | Not Available | Positive | 4196770 - 4197849 | 39432.7 |
| 6-carboxytetrahydropterin synthase qued | BK659_18675 | Not Available | Positive | 4197944 - 4198300 | 13644.3 |
| type iv secretion protein rhs | BK659_18680 | Not Available | Negative | 4198420 - 4201230 | 102832.0 |
| cytosine deaminase | BK659_18685 | Not Available | Positive | 4201375 - 4202613 | 45480.5 |
| diaminopimelate epimerase | BK659_18690 | Not Available | Negative | 4202755 - 4203747 | 34991.4 |
| hypothetical protein | BK659_18700 | Not Available | Negative | 4204657 - 4208364 | 138359.0 |
| multidrug abc transporter atp-binding protein | BK659_18705 | Not Available | Negative | 4208482 - 4210317 | 67159.5 |
| glutamine--scyllo-inositol aminotransferase | BK659_18710 | Not Available | Negative | 4210416 - 4211690 | 45904.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
