Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate 5-dehydrogenase | BK659_18610 | Not Available | Negative | 4183771 - 4184589 | 28940.7 |
| hypothetical protein | BK659_18615 | Not Available | Positive | 4184835 - 4185176 | 12131.7 |
| hypothetical protein | BK659_18620 | Not Available | Positive | 4185438 - 4185632 | 7207.78 |
| hypothetical protein | BK659_18625 | Not Available | Positive | 4185739 - 4185921 | 6165.7 |
| ai-2e family transporter | BK659_18630 | Not Available | Negative | 4185918 - 4186979 | 39041.1 |
| u32 family peptidase | BK659_18635 | Not Available | Positive | 4187137 - 4188462 | 49783.7 |
| chemotaxis protein | BK659_18640 | Not Available | Negative | 4188604 - 4190286 | 59590.9 |
| sodium:proton antiporter | BK659_18645 | Not Available | Negative | 4190356 - 4191675 | 45968.0 |
| chemotaxis protein | BK659_18650 | Not Available | Positive | 4191925 - 4194072 | 77044.7 |
| atp-binding protein | BK659_18655 | Not Available | Negative | 4194219 - 4195532 | 48843.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
