Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis protein pqqc | BK659_18560 | Not Available | Negative | 4170357 - 4171109 | 29058.4 |
| pyrroloquinoline quinone biosynthesis protein pqqb | BK659_18565 | Not Available | Negative | 4171276 - 4172187 | 33301.8 |
| coenzyme pqq biosynthesis protein pqqf | BK659_18570 | Not Available | Negative | 4172504 - 4174969 | 89882.7 |
| carbon-nitrogen hydrolase | BK659_18575 | Not Available | Negative | 4175012 - 4175812 | 29308.9 |
| amine oxidase | BK659_18580 | Not Available | Negative | 4175825 - 4177507 | 62340.1 |
| asnc family transcriptional regulator | BK659_18585 | Not Available | Negative | 4177648 - 4178109 | 16743.3 |
| Trna-met | Not Available | Not Available | Positive | 4178197 - 4178273 | Not Available |
| bifunctional diguanylate cyclase/phosphodiesterase | BK659_18595 | Not Available | Negative | 4178289 - 4182032 | 139664.0 |
| hypothetical protein | BK659_18600 | Not Available | Negative | 4182280 - 4182789 | 18813.8 |
| hypothetical protein | BK659_18605 | Not Available | Positive | 4182928 - 4183575 | 23948.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
