Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit alpha | BK659_18360 | Not Available | Positive | 4125824 - 4128841 | 109498.0 |
| sarcosine oxidase subunit gamma | BK659_18365 | Not Available | Positive | 4129008 - 4129640 | 22900.5 |
| formyltetrahydrofolate deformylase | BK659_18370 | Not Available | Positive | 4129832 - 4130689 | 32186.5 |
| formaldehyde dehydrogenase, glutathione-independent | BK659_18375 | Not Available | Positive | 4130898 - 4132097 | 42203.9 |
| hypothetical protein | BK659_18380 | Not Available | Negative | 4132207 - 4132431 | 8367.8 |
| dna-binding protein | BK659_18385 | Not Available | Negative | 4132517 - 4132729 | 7741.03 |
| hypothetical protein | BK659_18390 | Not Available | Negative | 4133066 - 4133338 | 10075.2 |
| anti-sigma factor | BK659_18395 | Not Available | Negative | 4133874 - 4134548 | 24215.2 |
| rna polymerase subunit sigma-70 | BK659_18400 | Not Available | Negative | 4134545 - 4135177 | 24072.8 |
| hypothetical protein | BK659_18405 | Not Available | Positive | 4135421 - 4135984 | 18112.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
