Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-methylproline demethylase | BK659_18305 | Not Available | Positive | 4110670 - 4112730 | 75592.7 |
| (fe-s)-binding protein | BK659_18310 | Not Available | Positive | 4112899 - 4114848 | 70319.8 |
| electron transfer flavoprotein subunit alpha | BK659_18315 | Not Available | Positive | 4114848 - 4116068 | 43250.7 |
| electron transfer flavoprotein subunit beta | BK659_18320 | Not Available | Positive | 4116085 - 4116855 | 26778.5 |
| rieske (2fe-2s) protein | BK659_18330 | Not Available | Negative | 4118362 - 4119657 | 48975.4 |
| hybrid-cluster nad(p)-dependent oxidoreductase | BK659_18335 | Not Available | Positive | 4120096 - 4121196 | 40512.7 |
| threonine aldolase | BK659_18340 | Not Available | Negative | 4121349 - 4122389 | 38241.2 |
| serine hydroxymethyltransferase | BK659_18345 | Not Available | Positive | 4122814 - 4124067 | 44662.5 |
| sarcosine oxidase subunit beta | BK659_18350 | Not Available | Positive | 4124091 - 4125341 | 45243.0 |
| sarcosine oxidase subunit delta | BK659_18355 | Not Available | Positive | 4125498 - 4125827 | 12551.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
