Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | BK659_18105 | Not Available | Positive | 4065134 - 4065385 | 9440.48 |
| phosphatidylinositol kinase | BK659_18110 | Not Available | Positive | 4065378 - 4066643 | 46917.2 |
| beta-hydroxylase | BK659_18115 | Not Available | Negative | 4066914 - 4067738 | 32042.4 |
| fructose-bisphosphate aldolase | BK659_18120 | Not Available | Negative | 4067918 - 4068211 | 10891.0 |
| polysaccharide lyase family 7 protein | BK659_18125 | Not Available | Negative | 4068598 - 4069269 | 24595.9 |
| two-component system response regulator | BK659_18130 | Not Available | Positive | 4069592 - 4071715 | 79281.3 |
| metal-dependent hydrolase | BK659_18135 | Not Available | Positive | 4071758 - 4072249 | 19178.2 |
| hypothetical protein | BK659_18140 | Not Available | Positive | 4072343 - 4072639 | 11046.1 |
| gnat family n-acetyltransferase | BK659_18145 | Not Available | Negative | 4072748 - 4073200 | 16988.3 |
| amino acid abc transporter substrate-binding protein | BK659_18150 | Not Available | Positive | 4073466 - 4074203 | 27707.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
