Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | BK659_18005 | Not Available | Negative | 4042720 - 4044582 | 67273.0 |
| amino acid abc transporter substrate-binding protein | BK659_18010 | Not Available | Negative | 4044808 - 4045623 | 30479.3 |
| methylenetetrahydrofolate reductase | BK659_18015 | Not Available | Negative | 4045807 - 4046652 | 31321.1 |
| adenosylhomocysteinase | BK659_18020 | Not Available | Negative | 4046784 - 4048193 | 51293.6 |
| acyl-coa thioesterase | BK659_18025 | Not Available | Positive | 4048517 - 4048921 | 15116.1 |
| mfs transporter | BK659_18030 | Not Available | Negative | 4049036 - 4050205 | 39933.2 |
| eama family transporter | BK659_18035 | Not Available | Positive | 4050435 - 4051268 | 31005.8 |
| hypothetical protein | BK659_18040 | Not Available | Positive | 4051304 - 4051687 | 14097.5 |
| transglycosylase | BK659_18045 | Not Available | Negative | 4051816 - 4052994 | 42322.4 |
| cytochrome c | BK659_18050 | Not Available | Positive | 4053123 - 4053572 | 16449.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
