Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenide, water dikinase seld | BK659_17655 | Not Available | Positive | 3972354 - 3973388 | 36569.1 |
| trna 2-selenouridine(34) synthase mnmh | BK659_17660 | Not Available | Positive | 3973388 - 3974491 | 41781.1 |
| hypothetical protein | BK659_17665 | Not Available | Negative | 3974662 - 3975717 | 37759.7 |
| histidine phosphatase family protein | BK659_17670 | Not Available | Negative | 3975812 - 3976486 | 25015.0 |
| glutathione s-transferase | BK659_17675 | Not Available | Positive | 3976811 - 3977509 | 26422.9 |
| phenazine biosynthesis protein phzf | BK659_17680 | Not Available | Positive | 3977558 - 3978400 | 30075.1 |
| delta-aminolevulinic acid dehydratase | BK659_17685 | Not Available | Positive | 3978616 - 3979590 | 35435.3 |
| fad-dependent oxidoreductase | BK659_17690 | Not Available | Negative | 3979609 - 3981138 | 56578.4 |
| hypothetical protein | BK659_17695 | Not Available | Positive | 3981475 - 3982572 | 40193.3 |
| isoprenylcysteine carboxyl methyltransferase | BK659_17700 | Not Available | Negative | 3982610 - 3983269 | 23656.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
