Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-carboxygeranoyl-coa hydratase | BK659_17555 | Not Available | Negative | 3950585 - 3951400 | 30077.0 |
| methylcrotonoyl-coa carboxylase | BK659_17560 | Not Available | Negative | 3951414 - 3953021 | 57474.1 |
| acyl-coa dehydrogenase | BK659_17565 | Not Available | Negative | 3953033 - 3954196 | 42411.8 |
| amp-binding protein | BK659_17570 | Not Available | Positive | 3954448 - 3956142 | 62370.8 |
| hydroxymethylglutaryl-coa lyase | BK659_17575 | Not Available | Negative | 3956760 - 3957659 | 31281.6 |
| merr family transcriptional regulator | BK659_17580 | Not Available | Negative | 3957721 - 3958119 | 15400.5 |
| lysr family transcriptional regulator | BK659_17585 | Not Available | Negative | 3958268 - 3959203 | 35441.2 |
| acyl-coa dehydrogenase | BK659_17590 | Not Available | Positive | 3959378 - 3960607 | 45449.0 |
| transcriptional regulator ftra | BK659_17595 | Not Available | Negative | 3960695 - 3961672 | 35714.0 |
| rhodanese | BK659_17600 | Not Available | Positive | 3961773 - 3962207 | 15238.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
