Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma factor | BK659_17505 | Not Available | Negative | 3940886 - 3941638 | 27787.0 |
| rna polymerase subunit sigma-24 | BK659_17510 | Not Available | Negative | 3941635 - 3942141 | 19296.2 |
| catalase | BK659_17515 | Not Available | Positive | 3942300 - 3943394 | 38976.0 |
| cytochrome b | BK659_17520 | Not Available | Positive | 3943391 - 3943933 | 19902.3 |
| mfs transporter | BK659_17525 | Not Available | Negative | 3943927 - 3945141 | 42501.0 |
| transcriptional regulator | BK659_17530 | Not Available | Positive | 3945243 - 3945689 | 16731.1 |
| hypothetical protein | BK659_17535 | Not Available | Negative | 3945732 - 3946883 | 43465.2 |
| duf3077 domain-containing protein | BK659_17540 | Not Available | Negative | 3947401 - 3947742 | 12491.5 |
| cro/cl family transcriptional regulator | BK659_17545 | Not Available | Positive | 3947872 - 3948537 | 24731.7 |
| 3-methylcrotonyl-coa carboxylase | BK659_17550 | Not Available | Negative | 3948636 - 3950585 | 70009.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
