Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-cystine transporter | BK659_17305 | Not Available | Negative | 3898334 - 3899725 | 48534.8 |
| serine/threonine transporter sstt | BK659_17310 | Not Available | Negative | 3900303 - 3901535 | 42304.0 |
| mfs transporter | BK659_17315 | Not Available | Positive | 3901861 - 3903015 | 40082.7 |
| lysr family transcriptional regulator | BK659_17320 | Not Available | Negative | 3903020 - 3903919 | 33614.8 |
| hypothetical protein | BK659_17325 | Not Available | Positive | 3904055 - 3904309 | 8759.21 |
| hypothetical protein | BK659_17330 | Not Available | Positive | 3904339 - 3905094 | 27208.4 |
| hypothetical protein | BK659_17335 | Not Available | Positive | 3905561 - 3906238 | 24658.9 |
| d-alanyl-d-alanine endopeptidase | BK659_17340 | Not Available | Negative | 3906321 - 3907262 | 34104.3 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | BK659_17345 | Not Available | Negative | 3907523 - 3908377 | 30537.1 |
| Trna-arg | Not Available | Not Available | Positive | 3908658 - 3908734 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
