Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | BK659_17055 | Not Available | Negative | 3845368 - 3846006 | 23671.5 |
| glutamine synthetase | BK659_17060 | Not Available | Negative | 3846248 - 3847624 | 51005.6 |
| glutamine amidotransferase | BK659_17065 | Not Available | Positive | 3847903 - 3848253 | 12124.2 |
| glutamine synthetase | BK659_17070 | Not Available | Positive | 3848292 - 3849650 | 51035.0 |
| aspartate aminotransferase family protein | BK659_17075 | Not Available | Positive | 3849704 - 3851068 | 49971.4 |
| spermidine/putrescine abc transporter substrate-binding protein potf | BK659_17080 | Not Available | Positive | 3851269 - 3852363 | 39724.4 |
| polyamine abc transporter substrate-binding protein | BK659_17085 | Not Available | Positive | 3852608 - 3853702 | 39778.5 |
| abc transporter atp-binding protein | BK659_17090 | Not Available | Positive | 3853774 - 3854916 | 42281.2 |
| putrescine abc transporter permease poth | BK659_17095 | Not Available | Positive | 3854913 - 3855833 | 34236.2 |
| putrescine abc transporter permease poti | BK659_17100 | Not Available | Positive | 3855830 - 3856720 | 32323.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
