Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system protein h | BK659_16955 | Not Available | Positive | 3822883 - 3823266 | 13301.4 |
| hypothetical protein | BK659_16960 | Not Available | Negative | 3823425 - 3824156 | 26643.5 |
| hypothetical protein | BK659_16965 | Not Available | Negative | 3824336 - 3825025 | 25082.4 |
| aminotransferase degt | BK659_16970 | Not Available | Negative | 3825419 - 3826561 | 41231.5 |
| glycine dehydrogenase (aminomethyl-transferring) | BK659_16975 | Not Available | Positive | 3826715 - 3829588 | 103850.0 |
| ribonucleotide reductase | BK659_16980 | Not Available | Negative | 3829746 - 3830078 | 11514.6 |
| type ii secretion system protein e | BK659_16985 | Not Available | Negative | 3830176 - 3831957 | 66349.9 |
| hypothetical protein | BK659_16990 | Not Available | Negative | 3832099 - 3832437 | 12570.1 |
| asnc family transcriptional regulator | BK659_16995 | Not Available | Positive | 3832563 - 3833036 | 17735.5 |
| adenylate cyclase | BK659_17000 | Not Available | Negative | 3833144 - 3834511 | 52255.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
