Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| delta-aminolevulinic acid dehydratase | BK659_16800 | Not Available | Positive | 3792036 - 3793049 | 37081.4 |
| rna degradosome polyphosphate kinase | BK659_16805 | Not Available | Positive | 3793068 - 3795290 | 83229.7 |
| exopolyphosphatase | BK659_16810 | Not Available | Negative | 3795483 - 3796985 | 56451.9 |
| amino acid abc transporter atp-binding protein | BK659_16815 | Not Available | Negative | 3797184 - 3797921 | 26796.7 |
| amino acid abc transporter permease | BK659_16820 | Not Available | Negative | 3797908 - 3798558 | 23632.4 |
| abc transporter permease | BK659_16825 | Not Available | Negative | 3798555 - 3799235 | 24804.9 |
| amino acid abc transporter substrate-binding protein | BK659_16830 | Not Available | Negative | 3799270 - 3800055 | 28119.2 |
| gntr family transcriptional regulator | BK659_16835 | Not Available | Positive | 3800310 - 3801014 | 25132.2 |
| thioredoxin | BK659_16840 | Not Available | Positive | 3801135 - 3801464 | 11763.2 |
| transcription termination factor rho | BK659_16845 | Not Available | Positive | 3801713 - 3802972 | 46972.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
