Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine transporter rhtb | BK659_16750 | Not Available | Positive | 3782463 - 3783095 | 22657.5 |
| penicillin-binding protein activator lpob | BK659_16755 | Not Available | Negative | 3783159 - 3783902 | 26931.9 |
| penicillin-binding protein activator lpob | BK659_16760 | Not Available | Negative | 3783906 - 3784493 | 21509.8 |
| hypothetical protein | BK659_16765 | Not Available | Negative | 3784529 - 3784900 | 13356.4 |
| hypothetical protein | BK659_16770 | Not Available | Negative | 3784914 - 3786311 | 50914.7 |
| cystathionine gamma-synthase | BK659_16775 | Not Available | Positive | 3786620 - 3788518 | 67667.2 |
| duf188 domain-containing protein | BK659_16780 | Not Available | Positive | 3788624 - 3789079 | 16486.1 |
| isoprenoid biosynthesis protein elbb | BK659_16785 | Not Available | Negative | 3789197 - 3789865 | 23209.8 |
| hypothetical protein | BK659_16790 | Not Available | Positive | 3789980 - 3791215 | 46921.2 |
| hypothetical protein | BK659_16795 | Not Available | Negative | 3791196 - 3791828 | 23777.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
