Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | BK659_16650 | Not Available | Negative | 3761994 - 3763241 | 45139.9 |
| iron donor protein cyay | BK659_16655 | Not Available | Positive | 3763663 - 3763995 | 12407.3 |
| hypothetical protein | BK659_16660 | Not Available | Positive | 3764000 - 3764224 | 8366.88 |
| nucleoside diphosphate kinase regulator | BK659_16665 | Not Available | Positive | 3764476 - 3764886 | 14698.5 |
| adenylate cyclase | BK659_16670 | Not Available | Negative | 3764894 - 3767743 | 108581.0 |
| tigr02647 family protein | BK659_16675 | Not Available | Negative | 3767931 - 3768176 | 8679.4 |
| hypothetical protein | BK659_16680 | Not Available | Negative | 3768393 - 3768677 | 10689.4 |
| glutathione s-transferase | BK659_16685 | Not Available | Positive | 3768803 - 3769462 | 23796.1 |
| argininosuccinate lyase | BK659_16690 | Not Available | Negative | 3769545 - 3770939 | 51666.8 |
| dna-binding response regulator | BK659_16695 | Not Available | Positive | 3771445 - 3772191 | 27661.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
