Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef-domain containing protein | BK659_16550 | Not Available | Positive | 3740602 - 3742272 | 61951.8 |
| multidrug transporter norm | BK659_16555 | Not Available | Negative | 3742420 - 3743817 | 50134.8 |
| lysr family transcriptional regulator | BK659_16560 | Not Available | Positive | 3743976 - 3744896 | 34536.4 |
| duf4432 domain-containing protein | BK659_16565 | Not Available | Positive | 3745050 - 3746264 | 44571.0 |
| hypothetical protein | BK659_16570 | Not Available | Negative | 3746373 - 3747803 | 52985.9 |
| hypothetical protein | BK659_16575 | Not Available | Positive | 3748131 - 3748358 | 7824.39 |
| hypothetical protein | BK659_16580 | Not Available | Positive | 3748425 - 3748628 | 7739.18 |
| hypothetical protein | BK659_16585 | Not Available | Positive | 3748924 - 3750081 | 44237.3 |
| hypothetical protein | BK659_16590 | Not Available | Positive | 3750322 - 3751065 | 27992.2 |
| hypothetical protein | BK659_16595 | Not Available | Positive | 3751083 - 3752399 | 50272.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
