Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_04380 | Not Available | Positive | 1057260 - 1058984 | 64181.7 |
| lipoprotein localization factor lolb | BK654_04385 | Not Available | Positive | 1058989 - 1059606 | 23200.6 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | BK654_04390 | Not Available | Positive | 1059608 - 1060459 | 30585.1 |
| Trna-gln | Not Available | Not Available | Positive | 1060497 - 1060571 | Not Available |
| ribose-phosphate pyrophosphokinase | BK654_04400 | Not Available | Positive | 1060619 - 1061560 | 34146.3 |
| 50s ribosomal protein l25/general stress protein ctc | BK654_04405 | Not Available | Positive | 1061704 - 1062306 | 21267.7 |
| aminoacyl-trna hydrolase | BK654_04410 | Not Available | Positive | 1062473 - 1063057 | 20904.2 |
| redox-regulated atpase ychf | BK654_04415 | Not Available | Positive | 1063080 - 1064180 | 40118.3 |
| abc transporter permease | BK654_04420 | Not Available | Positive | 1064474 - 1065682 | 41579.6 |
| calcium-binding protein | BK654_04425 | Not Available | Negative | 1065795 - 1067858 | 71969.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
