Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system-associated protein | BK659_16195 | Not Available | Positive | 3665695 - 3666213 | 18811.6 |
| type vi secretion protein | BK659_16200 | Not Available | Positive | 3666243 - 3667718 | 55646.9 |
| type vi secretion protein | BK659_16205 | Not Available | Positive | 3667732 - 3668139 | 14869.7 |
| hypothetical protein | BK659_16210 | Not Available | Positive | 3668150 - 3668674 | 17701.0 |
| hypothetical protein | BK659_16215 | Not Available | Positive | 3668744 - 3669676 | 34672.1 |
| hypothetical protein | BK659_16220 | Not Available | Positive | 3669679 - 3670104 | 16531.1 |
| hypothetical protein | BK659_16225 | Not Available | Positive | 3670150 - 3670542 | 15045.4 |
| type vi secretion protein | BK659_16230 | Not Available | Positive | 3670589 - 3672376 | 68016.0 |
| type vi secretion protein | BK659_16235 | Not Available | Positive | 3672340 - 3673347 | 38540.1 |
| clpv1 family t6ss atpase | BK659_16240 | Not Available | Positive | 3673361 - 3676015 | 96351.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
