Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein icmf | BK659_16145 | Not Available | Positive | 3650568 - 3654068 | 128947.0 |
| type vi secretion-associated protein | BK659_16150 | Not Available | Positive | 3654065 - 3654715 | 23082.5 |
| serine/threonine protein phosphatase | BK659_16155 | Not Available | Positive | 3654716 - 3655447 | 26222.7 |
| serine/threonine protein kinase | BK659_16160 | Not Available | Positive | 3655444 - 3658479 | 109401.0 |
| abc transporter atp-binding protein | BK659_16165 | Not Available | Positive | 3658479 - 3659195 | 25254.4 |
| hypothetical protein | BK659_16170 | Not Available | Positive | 3659195 - 3660391 | 42589.0 |
| type vi secretion protein | BK659_16175 | Not Available | Positive | 3660384 - 3662111 | 63163.2 |
| type vi secretion-associated lipoprotein tagq | BK659_16180 | Not Available | Positive | 3662198 - 3663127 | 32426.3 |
| hypothetical protein | BK659_16185 | Not Available | Negative | 3663526 - 3663705 | 6884.79 |
| type vi secretion system impa domain-containing protein | BK659_16190 | Not Available | Positive | 3664106 - 3665662 | 58566.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
