Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_16040 | Not Available | Positive | 3626483 - 3626662 | 6327.18 |
| hypothetical protein | BK659_16045 | Not Available | Positive | 3626698 - 3627096 | 14641.6 |
| hypothetical protein | BK659_16055 | Not Available | Negative | 3627489 - 3627767 | 10469.7 |
| type iv secretion protein rhs | BK659_16060 | Not Available | Negative | 3627769 - 3632220 | 165131.0 |
| hypothetical protein | BK659_16065 | Not Available | Negative | 3632233 - 3632667 | 16131.4 |
| type vi secretion protein impa | BK659_16070 | Not Available | Negative | 3632686 - 3634623 | 72309.6 |
| clpv1 family t6ss atpase | BK659_16075 | Not Available | Negative | 3634743 - 3637421 | 98014.8 |
| type vi secretion protein | BK659_16080 | Not Available | Negative | 3637414 - 3638466 | 39639.0 |
| type vi secretion system protein impg | BK659_16085 | Not Available | Negative | 3638430 - 3640289 | 69199.6 |
| type vi secretion system lysozyme | BK659_16090 | Not Available | Negative | 3640286 - 3640798 | 18673.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
