Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad/nad(p)-binding oxidoreductase | BK659_15835 | Not Available | Positive | 3583078 - 3584469 | 49121.5 |
| sarcosine oxidase subunit beta | BK659_15840 | Not Available | Positive | 3584466 - 3585620 | 41976.4 |
| acetylornithine deacetylase (arge) | BK659_15845 | Not Available | Positive | 3585617 - 3586774 | 41996.6 |
| succinate-semialdehyde dehydrogenase (nadp(+)) | BK659_15850 | Not Available | Positive | 3587063 - 3588520 | 51996.9 |
| tartrate dehydrogenase | BK659_15855 | Not Available | Positive | 3588547 - 3589626 | 39957.8 |
| glyoxylate/hydroxypyruvate reductase a | BK659_15860 | Not Available | Negative | 3589751 - 3590677 | 34202.5 |
| 4-aminobutyrate transaminase | BK659_15865 | Not Available | Positive | 3590949 - 3592241 | 46349.2 |
| 2-haloalkanoic acid dehalogenase | BK659_15870 | Not Available | Positive | 3592337 - 3592993 | 24360.2 |
| asnc family transcriptional regulator | BK659_15875 | Not Available | Positive | 3593039 - 3593527 | 18388.4 |
| amino acid abc transporter substrate-binding protein | BK659_15880 | Not Available | Negative | 3593571 - 3594338 | 28798.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
