Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin | BK659_15785 | Not Available | Negative | 3571470 - 3572177 | 24984.7 |
| gnat family n-acetyltransferase | BK659_15790 | Not Available | Negative | 3572247 - 3573104 | 30497.6 |
| aldehyde dehydrogenase | BK659_15795 | Not Available | Positive | 3573346 - 3574818 | 52640.8 |
| haloacid dehalogenase, type ii | BK659_15800 | Not Available | Positive | 3575353 - 3576021 | 25224.3 |
| fad-dependent oxidoreductase | BK659_15805 | Not Available | Positive | 3576067 - 3577341 | 45481.7 |
| abc transporter substrate-binding protein | BK659_15810 | Not Available | Positive | 3577434 - 3579071 | 59460.8 |
| abc transporter permease | BK659_15815 | Not Available | Positive | 3579120 - 3580076 | 33717.5 |
| dna-directed rna polymerase subunit alpha | BK659_15820 | Not Available | Positive | 3580073 - 3580948 | 30862.4 |
| abc transporter | BK659_15825 | Not Available | Positive | 3580950 - 3582791 | 66056.1 |
| nad(fad)-dependent dehydrogenase | BK659_15830 | Not Available | Positive | 3582788 - 3583096 | 11274.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
