Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | BK659_15730 | Not Available | Positive | 3560423 - 3561436 | 36799.7 |
| succinylglutamate desuccinylase | BK659_15735 | Not Available | Positive | 3561452 - 3562468 | 37186.3 |
| helix-turn-helix transcriptional regulator | BK659_15740 | Not Available | Negative | 3562539 - 3563324 | 29715.6 |
| carbon-nitrogen hydrolase | BK659_15745 | Not Available | Positive | 3563458 - 3564273 | 29721.6 |
| polyamine abc transporter substrate-binding protein | BK659_15750 | Not Available | Positive | 3564415 - 3565524 | 40734.6 |
| aminopeptidase | BK659_15755 | Not Available | Positive | 3565606 - 3566742 | 39961.2 |
| deaminase | BK659_15765 | Not Available | Positive | 3567322 - 3567858 | 19689.6 |
| hypothetical protein | BK659_15770 | Not Available | Positive | 3568224 - 3568808 | 21448.6 |
| hypothetical protein | BK659_15775 | Not Available | Positive | 3569055 - 3569768 | 25847.7 |
| mfs transporter | BK659_15780 | Not Available | Positive | 3570227 - 3571477 | 43178.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
