Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cellulose biosynthesis protein bcsc | BK659_15675 | Not Available | Positive | 3546582 - 3550058 | 128768.0 |
| nematocidal protein | BK659_15680 | Not Available | Negative | 3550333 - 3550857 | 18822.9 |
| nmra family transcriptional regulator | BK659_15690 | Not Available | Negative | 3551789 - 3552670 | 32374.3 |
| phosphohydrolase | BK659_15695 | Not Available | Negative | 3552776 - 3553417 | 23515.0 |
| arac family transcriptional regulator | BK659_15700 | Not Available | Positive | 3553493 - 3554566 | 39727.9 |
| endonuclease | BK659_15705 | Not Available | Positive | 3554928 - 3555803 | 31772.7 |
| arginine aminotransferase | BK659_15710 | Not Available | Positive | 3555996 - 3557999 | 72878.0 |
| amino acid abc transporter substrate-binding protein | BK659_15715 | Not Available | Positive | 3558026 - 3558808 | 28286.9 |
| abc transporter permease | BK659_15720 | Not Available | Positive | 3559006 - 3559719 | 25748.3 |
| nickel permease | BK659_15725 | Not Available | Positive | 3559725 - 3560423 | 25333.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
