Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit c | BK659_15575 | Not Available | Positive | 3524970 - 3526793 | 67260.6 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | BK659_15580 | Not Available | Positive | 3526827 - 3527387 | 20712.8 |
| Trna-gly | Not Available | Not Available | Positive | 3527451 - 3527526 | Not Available |
| hypothetical protein | BK659_15590 | Not Available | Negative | 3527740 - 3528141 | 14725.3 |
| short-chain dehydrogenase | BK659_15595 | Not Available | Negative | 3528200 - 3528958 | 26911.3 |
| lysr family transcriptional regulator | BK659_15600 | Not Available | Negative | 3529100 - 3530035 | 33651.1 |
| bleomycin resistance protein | BK659_15605 | Not Available | Negative | 3530260 - 3530643 | 14409.9 |
| fmn reductase | BK659_15610 | Not Available | Negative | 3530662 - 3531246 | 21823.2 |
| lysr family transcriptional regulator | BK659_15615 | Not Available | Positive | 3531416 - 3532309 | 31834.5 |
| dipeptidase | BK659_15620 | Not Available | Negative | 3532419 - 3534158 | 62393.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
