Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosidase | BK659_15275 | Not Available | Positive | 3445479 - 3448103 | 99936.8 |
| formyl transferase | BK659_15280 | Not Available | Negative | 3448233 - 3449951 | 63441.8 |
| hypothetical protein | BK659_15285 | Not Available | Negative | 3450392 - 3450757 | 13047.5 |
| addiction module antitoxin relb | BK659_15290 | Not Available | Positive | 3451270 - 3451563 | 10736.2 |
| putative addiction module antidote protein | BK659_15295 | Not Available | Positive | 3451566 - 3451856 | 10343.4 |
| amidohydrolase | BK659_15300 | Not Available | Negative | 3451860 - 3453815 | 72332.9 |
| scp-2 family sterol carrier protein | BK659_15305 | Not Available | Negative | 3454013 - 3454327 | 11038.3 |
| histidine phosphatase family protein | BK659_15310 | Not Available | Negative | 3454378 - 3455088 | 26106.3 |
| protease sohb | BK659_15315 | Not Available | Positive | 3455294 - 3456316 | 37984.0 |
| leucine rich repeat (lrr)-containing protein | BK659_15320 | Not Available | Positive | 3456530 - 3460363 | 142449.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
