Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| repressor lexa | BK659_15225 | Not Available | Positive | 3434890 - 3435507 | 22451.2 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | BK659_15230 | Not Available | Positive | 3435507 - 3436124 | 21536.9 |
| dna repair nucleotidyltransferase | BK659_15235 | Not Available | Positive | 3436132 - 3437547 | 53078.8 |
| error-prone dna polymerase | BK659_15240 | Not Available | Positive | 3437544 - 3440621 | 115454.0 |
| curli production assembly protein csgg | BK659_15245 | Not Available | Positive | 3440819 - 3441499 | 24123.8 |
| duf4810 domain-containing protein | BK659_15250 | Not Available | Positive | 3441530 - 3441901 | 14150.0 |
| hypothetical protein | BK659_15255 | Not Available | Positive | 3441898 - 3442557 | 22784.4 |
| hypothetical protein | BK659_15260 | Not Available | Positive | 3442904 - 3443143 | 9005.72 |
| sterol desaturase | BK659_15265 | Not Available | Negative | 3443208 - 3444362 | 44782.0 |
| lysr family transcriptional regulator | BK659_15270 | Not Available | Negative | 3444475 - 3445338 | 32791.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
