Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 3425241 - 3425328 | Not Available |
| bax inhibitor protein | BK659_15180 | Not Available | Positive | 3425453 - 3426124 | 24265.1 |
| hypothetical protein | BK659_15185 | Not Available | Negative | 3426189 - 3426518 | 11621.1 |
| asnc family transcriptional regulator | BK659_15190 | Not Available | Negative | 3426576 - 3427013 | 16396.0 |
| eama family transporter | BK659_15195 | Not Available | Positive | 3427147 - 3428040 | 31437.5 |
| hypothetical protein | BK659_15200 | Not Available | Negative | 3428048 - 3429094 | 38465.7 |
| nadp-dependent glyceraldehyde-3-phosphate dehydrogenase | BK659_15205 | Not Available | Negative | 3429158 - 3430783 | 59958.9 |
| peroxidase | BK659_15210 | Not Available | Positive | 3431105 - 3431992 | 32271.3 |
| amidohydrolase | BK659_15215 | Not Available | Negative | 3432075 - 3433820 | 62774.1 |
| lysr family transcriptional regulator | BK659_15220 | Not Available | Positive | 3433925 - 3434842 | 34210.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
