Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_15125 | Not Available | Negative | 3415276 - 3415461 | 7074.53 |
| sodium:proton antiporter | BK659_15130 | Not Available | Negative | 3415927 - 3416601 | 24486.2 |
| glutathione s-transferase | BK659_15135 | Not Available | Negative | 3417253 - 3417927 | 25029.3 |
| short-chain dehydrogenase | BK659_15140 | Not Available | Negative | 3418009 - 3418755 | 26440.5 |
| lysr family transcriptional regulator | BK659_15145 | Not Available | Positive | 3418890 - 3419777 | 33047.7 |
| nadph:quinone oxidoreductase | BK659_15150 | Not Available | Negative | 3420357 - 3421355 | 35579.6 |
| alpha/beta hydrolase | BK659_15155 | Not Available | Negative | 3421402 - 3422271 | 31199.7 |
| sdr family oxidoreductase | BK659_15160 | Not Available | Negative | 3422354 - 3423142 | 27919.4 |
| alkene reductase | BK659_15165 | Not Available | Negative | 3423182 - 3424282 | 39020.9 |
| tetr family transcriptional regulator | BK659_15170 | Not Available | Positive | 3424432 - 3425004 | 20061.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
