Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_15075 | Not Available | Negative | 3408423 - 3408671 | 9271.13 |
| hypothetical protein | BK659_15080 | Not Available | Positive | 3408883 - 3409221 | 12014.4 |
| gnat family n-acetyltransferase | BK659_15085 | Not Available | Negative | 3409429 - 3409872 | 16850.3 |
| chitin-binding protein | BK659_15090 | Not Available | Positive | 3410186 - 3410821 | 23583.7 |
| gdp-mannose pyrophosphatase | BK659_15095 | Not Available | Positive | 3410967 - 3411560 | 22191.2 |
| duf2188 domain-containing protein | BK659_15100 | Not Available | Positive | 3411776 - 3411967 | 6976.49 |
| hypothetical protein | BK659_15105 | Not Available | Negative | 3412048 - 3412248 | 7679.08 |
| duf159 family protein | BK659_15110 | Not Available | Negative | 3412342 - 3413055 | 26598.7 |
| chain-length determining protein | BK659_15115 | Not Available | Positive | 3413499 - 3414785 | 48061.4 |
| hypothetical protein | BK659_15120 | Not Available | Negative | 3414933 - 3415112 | 6660.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
