Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretin | BK659_14925 | Not Available | Negative | 3378017 - 3378814 | 29055.9 |
| gnat family n-acetyltransferase | BK659_14930 | Not Available | Negative | 3379059 - 3379484 | 15841.1 |
| cupin | BK659_14935 | Not Available | Negative | 3379477 - 3380643 | 44054.1 |
| adenylosuccinate lyase | BK659_14940 | Not Available | Negative | 3380729 - 3382099 | 50703.7 |
| lysogenization regulator hfld | BK659_14945 | Not Available | Negative | 3382227 - 3382850 | 23048.3 |
| trna 2-thiouridine(34) synthase mnma | BK659_14950 | Not Available | Negative | 3382847 - 3383980 | 41984.7 |
| nudix hydrolase | BK659_14955 | Not Available | Negative | 3384040 - 3384486 | 16661.8 |
| isocitrate dehydrogenase (nadp(+)) | BK659_14960 | Not Available | Negative | 3384701 - 3386926 | 79957.6 |
| nadp-dependent isocitrate dehydrogenase | BK659_14965 | Not Available | Positive | 3387419 - 3388675 | 45430.8 |
| cold shock domain protein cspd | BK659_14970 | Not Available | Negative | 3388776 - 3389039 | 9364.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
