Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | BK659_14825 | Not Available | Positive | 3352781 - 3353983 | 42978.7 |
| mfs transporter | BK659_14830 | Not Available | Positive | 3354048 - 3355577 | 55061.3 |
| udp-2,3-diacylglucosamine diphosphatase | BK659_14835 | Not Available | Negative | 3355705 - 3356457 | 28276.6 |
| peptidylprolyl isomerase | BK659_14840 | Not Available | Negative | 3356454 - 3356957 | 18286.7 |
| glutamine--trna ligase | BK659_14845 | Not Available | Positive | 3357220 - 3358917 | 64420.9 |
| cysteine--trna ligase | BK659_14850 | Not Available | Positive | 3358938 - 3360320 | 51502.3 |
| nadh-quinone oxidoreductase subunit n | BK659_14855 | Not Available | Negative | 3360598 - 3362061 | 51881.3 |
| nadh-quinone oxidoreductase subunit m | BK659_14860 | Not Available | Negative | 3362069 - 3363601 | 55837.7 |
| nadh-quinone oxidoreductase subunit l | BK659_14865 | Not Available | Negative | 3363641 - 3365494 | 66541.6 |
| nadh-quinone oxidoreductase subunit k | BK659_14870 | Not Available | Negative | 3365491 - 3365799 | 10984.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
