Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair coupling factor | BK659_14720 | Not Available | Negative | 3320868 - 3324317 | 128756.0 |
| type i glyceraldehyde-3-phosphate dehydrogenase | BK659_14725 | Not Available | Positive | 3324486 - 3325949 | 53125.7 |
| class c beta-lactamase | BK659_14730 | Not Available | Positive | 3326119 - 3327285 | 42037.5 |
| hypothetical protein | BK659_14735 | Not Available | Positive | 3328058 - 3329269 | 44339.5 |
| hypothetical protein | BK659_14740 | Not Available | Positive | 3329266 - 3330531 | 44863.3 |
| cellulose synthase | BK659_14745 | Not Available | Positive | 3330533 - 3332683 | 80216.4 |
| rnd transporter | BK659_14750 | Not Available | Positive | 3332693 - 3334132 | 51841.9 |
| citrate-proton symporter | BK659_14755 | Not Available | Negative | 3334257 - 3335558 | 46261.3 |
| nad(p)(+) transhydrogenase | BK659_14765 | Not Available | Positive | 3337157 - 3338551 | 50836.6 |
| glycerophosphodiester phosphodiesterase | BK659_14770 | Not Available | Negative | 3338594 - 3339316 | 26728.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
