Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide pyruvyl transferase | BK659_14520 | Not Available | Positive | 3275110 - 3276243 | 42418.4 |
| hypothetical protein | BK659_14525 | Not Available | Positive | 3276240 - 3277526 | 47927.4 |
| glycosyl transferase family 1 | BK659_14530 | Not Available | Positive | 3277529 - 3278623 | 41316.2 |
| glycosyl transferase | BK659_14535 | Not Available | Positive | 3278613 - 3279728 | 41864.1 |
| dtdp-glucose 4,6-dehydratase | BK659_14540 | Not Available | Positive | 3279739 - 3280809 | 40199.2 |
| glucose-1-phosphate thymidylyltransferase | BK659_14545 | Not Available | Positive | 3280862 - 3281740 | 31860.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | BK659_14550 | Not Available | Positive | 3281737 - 3282276 | 20448.2 |
| dtdp-4-dehydrorhamnose reductase | BK659_14555 | Not Available | Positive | 3282279 - 3283172 | 32080.0 |
| hypothetical protein | BK659_14560 | Not Available | Positive | 3283629 - 3283940 | 9247.11 |
| capsular biosynthesis protein | BK659_14565 | Not Available | Positive | 3284082 - 3285140 | 38079.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
