Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine transporter lyse | BK659_14470 | Not Available | Positive | 3265210 - 3265830 | 21941.8 |
| hypothetical protein | BK659_14475 | Not Available | Negative | 3265861 - 3266193 | 12065.5 |
| glutamine cyclotransferase | BK659_14480 | Not Available | Negative | 3266311 - 3266940 | 22680.5 |
| dna-binding protein | BK659_14485 | Not Available | Negative | 3266976 - 3268196 | 43546.1 |
| transcriptional activator rfah | BK659_14490 | Not Available | Negative | 3268325 - 3268831 | 19144.1 |
| phosphomannomutase | BK659_14495 | Not Available | Negative | 3268828 - 3269259 | 15922.9 |
| phosphotyrosine protein phosphatase | BK659_14500 | Not Available | Positive | 3269889 - 3270266 | 13761.6 |
| tyrosine-protein kinase | BK659_14505 | Not Available | Positive | 3270312 - 3272540 | 81131.9 |
| polysaccharide biosynthesis protein | BK659_14510 | Not Available | Positive | 3272743 - 3274032 | 47692.8 |
| nitroreductase | BK659_14515 | Not Available | Positive | 3274093 - 3275076 | 36987.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
