Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isomerase | BK659_14420 | Not Available | Positive | 3255835 - 3257052 | 44811.0 |
| choline dehydrogenase | BK659_14425 | Not Available | Positive | 3257214 - 3258821 | 58644.1 |
| asnc family transcriptional regulator | BK659_14430 | Not Available | Negative | 3259009 - 3259494 | 18372.3 |
| stress responsive protein | BK659_14435 | Not Available | Positive | 3259724 - 3260101 | 14325.2 |
| hypothetical protein | BK659_14440 | Not Available | Positive | 3260119 - 3260541 | 15031.1 |
| cof synthetase | BK659_14445 | Not Available | Positive | 3260555 - 3261955 | 51417.9 |
| branched-chain-amino-acid transaminase | BK659_14450 | Not Available | Positive | 3261958 - 3262923 | 35029.2 |
| bacilysin biosynthesis protein baca | BK659_14455 | Not Available | Positive | 3262945 - 3263565 | 22202.6 |
| carboxymuconolactone decarboxylase | BK659_14460 | Not Available | Positive | 3263640 - 3264209 | 20965.1 |
| cro/cl family transcriptional regulator | BK659_14465 | Not Available | Positive | 3264213 - 3265166 | 33750.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
