Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate-semialdehyde dehydrogenase (nadp(+)) | BK659_14370 | Not Available | Positive | 3242337 - 3243770 | 50880.4 |
| lysr family transcriptional regulator | BK659_14375 | Not Available | Negative | 3243824 - 3244699 | 32485.2 |
| hypothetical protein | BK659_14380 | Not Available | Negative | 3244945 - 3246126 | 43631.7 |
| microcin abc transporter atp-binding protein | BK659_14385 | Not Available | Negative | 3246213 - 3247871 | 60117.2 |
| abc transporter permease | BK659_14390 | Not Available | Negative | 3247874 - 3248710 | 29851.5 |
| abc transporter permease | BK659_14395 | Not Available | Negative | 3248707 - 3249660 | 34648.2 |
| abc transporter substrate-binding protein | BK659_14400 | Not Available | Negative | 3249736 - 3251379 | 60847.8 |
| lysr family transcriptional regulator | BK659_14405 | Not Available | Positive | 3251750 - 3252682 | 35130.9 |
| aldehyde dehydrogenase | BK659_14410 | Not Available | Positive | 3252917 - 3254341 | 50733.5 |
| mfs transporter | BK659_14415 | Not Available | Positive | 3254499 - 3255821 | 47841.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
