Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | BK659_14320 | Not Available | Positive | 3228902 - 3229522 | 22987.4 |
| long-chain fatty acid transport protein | BK659_14325 | Not Available | Positive | 3229719 - 3230990 | 45449.1 |
| short-chain dehydrogenase | BK659_14330 | Not Available | Negative | 3231101 - 3231886 | 28553.0 |
| rnd transporter | BK659_14335 | Not Available | Negative | 3232055 - 3233515 | 51535.0 |
| efflux transporter periplasmic adaptor subunit | BK659_14340 | Not Available | Positive | 3233734 - 3234843 | 38740.2 |
| mfs transporter | BK659_14345 | Not Available | Positive | 3234840 - 3237989 | 114641.0 |
| beta-ketoacyl-acp synthase ii | BK659_14350 | Not Available | Positive | 3238036 - 3239334 | 44732.9 |
| nad(p)-dependent oxidoreductase | BK659_14355 | Not Available | Positive | 3239490 - 3240341 | 29383.9 |
| formaldehyde-activating enzyme | BK659_14360 | Not Available | Positive | 3240783 - 3241295 | 17951.3 |
| alcohol dehydrogenase | BK659_14365 | Not Available | Positive | 3241306 - 3242340 | 38344.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
